GoMRI
Investigating the effect of oil spills
on the environment and public health.
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Funding Source: Year 5-7 Consortia Grants (RFP-IV)

Project Publications & Presentations

Ecosystem Impacts of Oil and Gas Inputs to the Gulf-2 (ECOGIG-2)

Journal Articles - 92

2021

Technology, N. J. I. o., Boufadel, M., Bracco, A., Chassignet, E., Chen, S., D’Asaro, E., Dewar, W., Garcia-Pineda, O., Justić, D., Katz, J., Kourafalou, V., MacDonald, I., Özgökmen, T., Paris-Limouzy, C., Socolofsky, S., Halpern, D., & Shepherd, J. (2021). Physical Transport Processes that Affect the Distribution of Oil in the Gulf of Mexico: Observations and Modeling. Oceanography, 34(1), 58-75.
University, A., Halanych, K., Ainsworth, C., Cordes, E., Dodge, R., Huettel, M., Mendelssohn, I., Murawski, S., Paris-Limouzy, C., Schwing, P., Shaw, R., & Sutton, T. (2021). Effects of Petroleum By-Products and Dispersants on Ecosystems. Oceanography, 34(1), 152-163.
Christi, T. A. U., McKinney, L., Shepherd, J., Wilson, C., Hogarth, W., Chanton, J., Murawski, S., Sandifer, P., Sutton, T., Yoskowitz, D., Wowk, K., Özgökmen, T., Joye, S., & Caffey, R. (2021). The Gulf of Mexico: An Overview. Oceanography, 34(1), 30-43.
Rogers, K. L., Bosman, S. H., Wildermann, N., Rosenheim, B. E., Montoya, J. P., Hollander, D., Zhao, T., & Chanton, J. P. (2021). Mapping spatial and temporal variation of seafloor organic matter Δ14C and δ13C in the Northern Gulf of Mexico following the Deepwater Horizon Oil Spill. Marine Pollution Bulletin, 164, 112076.
Weiman, S., Joye, S., Kostka, J., Halanych, K., & Colwell, R. (2021). GoMRI Insights into Microbial Genomics and Hydrocarbon Bioremediation Response in Marine Ecosystems. Oceanography, 34(1), 124-135.
Xu, L., Zhuang, G., Montgomery, A., Liang, Q., Joye, S. B., & Wang, F. (2021). Methyl‐compounds driven benthic carbon cycling in the sulfate‐reducing sediments of South China Sea. Environmental Microbiology, 23(2), 641-651.

2020

Bracco, A., Paris, C. B., Esbaugh, A. J., Frasier, K., Joye, S. B., Liu, G., Polzin, K. L., & Vaz, A. C. (2020). Transport, Fate and Impacts of the Deep Plume of Petroleum Hydrocarbons Formed During the Macondo Blowout. Frontiers in Marine Science, 7.
Johansen, C., Macelloni, L., Natter, M., Silva, M., Woosley, M., Woolsey, A., Diercks, A., Hill, J., Viso, R., Marty, E., Lobodin, V., Shedd, W., Joye, S., & MacDonald, I. (2020). Hydrocarbon migration pathway and methane budget for a Gulf of Mexico natural seep site: Green Canyon 600. Earth and Planetary Science Letters, 545, 116411.
Passow, U., & Stout, S. A. (2020). Character and sedimentation of “lingering” Macondo oil to the deep-sea after the Deepwater Horizon oil spill. Marine Chemistry, 218, 103733.
Rogener, M. K., Sipler, R. E., Hunter, K. S., Bronk, D. A., & Joye, S. B. (2020). Pelagic methane oxidation in the northern Chukchi Sea. Limnology and Oceanography, 65(1), 96-110.
Rooze, J., Peterson, L., Peterson, R. N., & Meile, C. (2020). Porewater flow patterns in surficial cold seep sediments inferred from conservative tracer profiles and early diagenetic modeling. Chemical Geology, 536, 119468.
Schwing, P. T., Montagna, P. A., Joye, S. B., Paris, C. B., Cordes, E. E., McClain, C. R., Kilborn, J. P., & Murawski, S. A. (2020). A Synthesis of Deep Benthic Faunal Impacts and Resilience Following the Deepwater Horizon Oil Spill. Frontiers in Marine Science, 7.
Vohsen, S. A., Anderson, K. E., Gade, A. M., Gruber-Vodicka, H. R., Dannenberg, R. P., Osman, E. O., Dubilier, N., Fisher, C. R., & Baums, I. B. (2020). Deep-sea corals provide new insight into the ecology, evolution, and the role of plastids in widespread apicomplexan symbionts of anthozoans. Microbiome, 8(1).
Weinnig, A. M., Gómez, C. E., Hallaj, A., & Cordes, E. E. (2020). Cold-water coral (Lophelia pertusa) response to multiple stressors: High temperature affects recovery from short-term pollution exposure. Scientific Reports, 10(1).

2019

Beresford, S., Kastler, J., McDonald, R., Dinicola, D., & Fillingham, K. (2019). Deepwater Horizon Oil Spill Impacts on Organisms and Habitats. Current: The Journal of Marine Education, 33(1), 21.
Bowles, M., Samarkin, V., Hunter, K., Finke, N., Teske, A., Girguis, P., & Joye, S. (2019). Remarkable Capacity for Anaerobic Oxidation of Methane at High Methane Concentration. Geophysical Research Letters, 46(21), 12192-12201.
Bracco, A., Liu, G., Galaska, M. P., Quattrini, A. M., & Herrera, S. (2019). Integrating physical circulation models and genetic approaches to investigate population connectivity in deep-sea corals. Journal of Marine Systems, 198, 103189.
Bracco, A., Liu, G., & Sun, D. (2019). Mesoscale-submesoscale interactions in the Gulf of Mexico: From oil dispersion to climate. Chaos, Solitons & Fractals, 119, 63-72.
Bracken, L., Dinicola, D., Kastler, J., & Beresford, S. (2019). Technological Advances in Ocean Sciences Resulting from the Deepwater Horizon Oil Spill. Current: The Journal of Marine Education, 33(1), 33.
Davenport, E., Bracken, L., Beresford, S., & Conover, M. (2019). The Story of Oil in the Gulf of Mexico: Where Did the Oil Go?. Current: The Journal of Marine Education, 33(1), 7.
Diercks, A., Macelloni, L., D’Emidio, M., Lucker, S., Woolsey, A., & Woolsey, M. U. (2019). High-resolution seismo-acoustic characterization of Green Canyon 600, a perennial hydrocarbon seep in Gulf of Mexico deep water. Marine Geophysical Research, 40(3), 357-370.
Diercks, A., Ziervogel, K., Sibert, R., Joye, S. B., Asper, V., & Montoya, J. P. (2019). Vertical marine snow distribution in the stratified, hypersaline, and anoxic Orca Basin (Gulf of Mexico). Elementa: Science of the Anthropocene, 7.
Girard, F., Cruz, R., Glickman, O., Harpster, T., & Fisher, C. R. (2019). In situ growth of deep-sea octocorals after the Deepwater Horizon oil spill. Elementa: Science of the Anthropocene, 7.
Greely, T., Kastler, J., Beresford, S., & Fillingham, K. (2019). An Underwater Blizzard of Marine Oil Snow. Current: The Journal of Marine Education, 33(1), 17.
Kastler, J., Fillingham, K., Beresford, S., & Greely, T. (2019). Introduction to the GoMRI Special Issue on Research Resulting from the 2010 Deepwater Horizon Oil Spill. Current: The Journal of Marine Education, 33(1), 2.
Meile, C., & Scheibe, T. D. (2019). Reactive Transport Modeling of Microbial Dynamics. Elements, 15(2), 111-116.
Rogers, K. L., Bosman, S. H., Lardie-Gaylord, M., McNichol, A., Rosenheim, B. E., Montoya, J. P., & Chanton, J. P. (2019). Petrocarbon evolution: Ramped pyrolysis/oxidation and isotopic studies of contaminated oil sediments from the Deepwater Horizon oil spill in the Gulf of Mexico. PLOS ONE, 14(2), e0212433.
Rogers, K. L., Bosman, S. H., Weber, S., Magen, C., Montoya, J. P., & Chanton, J. P. (2019). Sources of carbon to suspended particulate organic matter in the northern Gulf of Mexico. Elementa: Science of the Anthropocene, 7.
Vohsen, S. A., Fisher, C. R., & Baums, I. B. (2019). Metabolomic richness and fingerprints of deep-sea coral species and populations. Metabolomics, 15(3).
Zhuang, G., Montgomery, A., & Joye, S. B. (2019). Heterotrophic metabolism of C1 and C2 low molecular weight compounds in northern Gulf of Mexico sediments: Controlling factors and implications for organic carbon degradation. Geochimica et Cosmochimica Acta, 247, 243-260.
Zhuang, G., Montgomery, A., Samarkin, V. A., Song, M., Liu, J., Schubotz, F., Teske, A., Hinrichs, K., & Joye, S. B. (2019). Generation and Utilization of Volatile Fatty Acids and Alcohols in Hydrothermally Altered Sediments in the Guaymas Basin, Gulf of California. Geophysical Research Letters, 46(5), 2637-2646.
Zhuang, G., Peña‐Montenegro, T. D., Montgomery, A., Montoya, J. P., & Joye, S. B. (2019). Significance of Acetate as a Microbial Carbon and Energy Source in the Water Column of Gulf of Mexico: Implications for Marine Carbon Cycling. Global Biogeochemical Cycles, 33(2), 223-235.
Ziervogel, K., Joye, S. B., Kleindienst, S., Malkin, S. Y., Passow, U., Steen, A. D., & Arnosti, C. (2019). Polysaccharide hydrolysis in the presence of oil and dispersants: Insights into potential degradation pathways of exopolymeric substances (EPS) from oil-degrading bacteria. Elementa: Science of the Anthropocene, 7.

2018

Paris, C. B., Berenshtein, I., Trillo, M. L., Faillettaz, R., Olascoaga, M. J., Aman, Z. M., Schlüter, M., & Joye, S. B. (2018). BP Gulf Science Data Reveals Ineffectual Subsea Dispersant Injection for the Macondo Blowout. Frontiers in Marine Science, 5.
Beresford, S., Fillingham, K., & Miller‐Way, T. (2018). Recommendations for Science Outreach Program Development: Perspectives from Gulf of Mexico Research Initiative Consortia. Limnology and Oceanography Bulletin, 27(3), 67-75.
Bracco, A., Choi, J., Kurian, J., & Chang, P. (2018). Vertical and horizontal resolution dependency in the model representation of tracer dispersion along the continental slope in the northern Gulf of Mexico. Ocean Modelling, 122, 13-25.
Chanton, J. P., Giering, S. L., Bosman, S. H., Rogers, K. L., Sweet, J., Asper, V. L., Diercks, A. R., & Passow, U. (2018). Isotopic composition of sinking particles: Oil effects, recovery and baselines in the Gulf of Mexico, 2010–2015. Elementa: Science of the Anthropocene, 6.
da Silva, C. E., & Castelao, R. M. (2018). Mississippi River Plume Variability in the Gulf of Mexico From SMAP and MODIS‐Aqua Observations. Journal of Geophysical Research: Oceans, 123(9), 6620-6638.
DeLeo, D. M., Herrera, S., Lengyel, S. D., Quattrini, A., Kulathinal, R. J., & Cordes, E. E. (2018). Gene expression profiling reveals deep‐sea coral response to the Deepwater Horizon oil spill. Molecular Ecology, 27(20), 4066-4077.
Diercks, A., Dike, C., Asper, V. L., DiMarco, S. F., Chanton, J. P., & Passow, U. (2018). Scales of seafloor sediment resuspension in the northern Gulf of Mexico. Elementa: Science of the Anthropocene, 6.
Giering, S., Yan, B., Sweet, J., Asper, V., Diercks, A., Chanton, J., Pitiranggon, M., & Passow, U. (2018). The ecosystem baseline for particle flux in the Northern Gulf of Mexico. Elementa: Science of the Anthropocene, 6.
Girard, F., & Fisher, C. R. (2018). Long-term impact of the Deepwater Horizon oil spill on deep-sea corals detected after seven years of monitoring. Biological Conservation, 225, 117-127.
Girard, F., Shea, K., & Fisher, C. R. (2018). Projecting the recovery of a long‐lived deep‐sea coral species after the Deepwater Horizon oil spill using state‐structured models. Journal of Applied Ecology, 55(4), 1812-1822.
Hamdan, L. J., Salerno, J. L., Reed, A., Joye, S. B., & Damour, M. (2018). The impact of the Deepwater Horizon blowout on historic shipwreck-associated sediment microbiomes in the northern Gulf of Mexico. Scientific Reports, 8(1).
Joye, S., Kleindienst, S., & Peña-Montenegro, T. D. (2018). SnapShot: Microbial Hydrocarbon Bioremediation. Cell, 172(6), 1336-1336.e1.
Klotz, F., Brinkhoff, T., Freese, H. M., Wietz, M., Teske, A., Simon, M., & Giebel, H. (2018). Tritonibacter horizontis gen. nov., sp. nov., a member of the Rhodobacteraceae, isolated from the Deepwater Horizon oil spill. International Journal of Systematic and Evolutionary Microbiology, 68(3), 736-744.
Liu, G., Bracco, A., & Passow, U. (2018). The influence of mesoscale and submesoscale circulation on sinking particles in the northern Gulf of Mexico. Elementa: Science of the Anthropocene, 6.
McFarlin, K. M., Perkins, M. J., Field, J. A., & Leigh, M. B. (2018). Biodegradation of Crude Oil and Corexit 9500 in Arctic Seawater. Frontiers in Microbiology, 9.
Rogener, M. K., Bracco, A., Hunter, K. S., Saxton, M. A., & Joye, S. B. (2018). Long-term impact of the Deepwater Horizon oil well blowout on methane oxidation dynamics in the northern Gulf of Mexico. Elementa: Science of the Anthropocene, 6.
Woodson, C. B., Schramski, J. R., & Joye, S. B. (2018). A unifying theory for top-heavy ecosystem structure in the ocean. Nature Communications, 9(1).
Zhuang, G., Montgomery, A., Sibert, R. J., Rogener, M., Samarkin, V. A., & Joye, S. B. (2018). Effects of pressure, methane concentration, sulfate reduction activity, and temperature on methane production in surface sediments of the Gulf of Mexico. Limnology and Oceanography, 63(5), 2080-2092.
Zhuang, G., Peña‐Montenegro, T. D., Montgomery, A., Hunter, K. S., & Joye, S. B. (2018). Microbial metabolism of methanol and methylamine in the Gulf of Mexico: insight into marine carbon and nitrogen cycling. Environmental Microbiology, 20(12), 4543-4554.

2017

Babcock-Adams, L., Chanton, J. P., Joye, S. B., & Medeiros, P. M. (2017). Hydrocarbon composition and concentrations in the Gulf of Mexico sediments in the 3 years following the Macondo well blowout. Environmental Pollution, 229, 329-338.
Daneshgar Asl, S., Dukhovskoy, D. S., Bourassa, M., & MacDonald, I. R. (2017). Hindcast modeling of oil slick persistence from natural seeps. Remote Sensing of Environment, 189, 96-107.
Johansen, C., Todd, A. C., & MacDonald, I. R. (2017). Time series video analysis of bubble release processes at natural hydrocarbon seeps in the Northern Gulf of Mexico. Marine and Petroleum Geology, 82, 21-34.
Orcutt, B. N., Lapham, L. L., Delaney, J., Sarode, N., Marshall, K. S., Whaley-Martin, K. J., Slater, G., Wheat, C. G., & Girguis, P. R. (2017). Microbial response to oil enrichment in Gulf of Mexico sediment measured using a novel long-term benthic lander system. Elementa: Science of the Anthropocene, 5.
Perkins, M. J., Joye, S. B., & Field, J. A. (2017). Selective quantification of DOSS in marine sediment and sediment-trap solids by LC-QTOF-MS. Analytical and Bioanalytical Chemistry, 409(4), 971-978.
Romero, I. C., Toro-Farmer, G., Diercks, A., Schwing, P., Muller-Karger, F., Murawski, S., & Hollander, D. J. (2017). Large-scale deposition of weathered oil in the Gulf of Mexico following a deep-water oil spill. Environmental Pollution, 228, 179-189.
Ruiz-Ramos, D. V., Fisher, C. R., & Baums, I. B. (2017). Stress response of the black coral <i>Leiopathes glaberrima</i> when exposed to sub-lethal amounts of crude oil and dispersant. Elementa: Science of the Anthropocene, 5.
Silva, M., & MacDonald, I. (2017). Habitat suitability modeling for mesophotic coral in the northeastern Gulf of Mexico. Marine Ecology Progress Series, 583, 121-136.
Thurnherr, A. M., Goszczko, I., & Bahr, F. (2017). Improving LADCP Velocity with External Heading, Pitch, and Roll. Journal of Atmospheric and Oceanic Technology, 34(8), 1713-1721.
Zhong, Y., Bracco, A., Tian, J., Dong, J., Zhao, W., & Zhang, Z. (2017). Observed and simulated submesoscale vertical pump of an anticyclonic eddy in the South China Sea. Scientific Reports, 7(1).

2016

Georgian, S. E., Dupont, S., Kurman, M., Butler, A., Strömberg, S. M., Larsson, A. I., & Cordes, E. E. (2016). Biogeographic variability in the physiological response of the cold‐water coral <i><scp>L</scp>ophelia pertusa</i> to ocean acidification. Marine Ecology, 37(6), 1345-1359.
Bracco, A., Choi, J., Joshi, K., Luo, H., & McWilliams, J. C. (2016). Submesoscale currents in the northern Gulf of Mexico: Deep phenomena and dispersion over the continental slope. Ocean Modelling, 101, 43-58.
Cardona, Y., Ruiz-Ramos, D. V., Baums, I. B., & Bracco, A. (2016). Potential Connectivity of Coldwater Black Coral Communities in the Northern Gulf of Mexico. PLOS ONE, 11(5), e0156257.
Conti, A., D’Emidio, M., Macelloni, L., Lutken, C., Asper, V., Woolsey, M., Jarnagin, R., Diercks, A., & Highsmith, R. (2016). Morpho-acoustic characterization of natural seepage features near the Macondo Wellhead (ECOGIG site OC26, Gulf of Mexico). Deep Sea Research Part II: Topical Studies in Oceanography, 129, 53-65.
D’souza, N. A., Subramaniam, A., Juhl, A. R., Hafez, M., Chekalyuk, A., Phan, S., Yan, B., MacDonald, I., Weber, S. C., & Montoya, J. P. (2016). Elevated surface chlorophyll associated with natural oil seeps in the Gulf of Mexico. Nature Geoscience, 9(3), 215-218.
Daly, K. L., Passow, U., Chanton, J., & Hollander, D. (2016). Assessing the impacts of oil-associated marine snow formation and sedimentation during and after the Deepwater Horizon oil spill. Anthropocene, 13, 18-33.
Dombrowski, N., Donaho, J. A., Gutierrez, T., Seitz, K. W., Teske, A. P., & Baker, B. J. (2016). Reconstructing metabolic pathways of hydrocarbon-degrading bacteria from the Deepwater Horizon oil spill. Nature Microbiology, 1(7).
Fernández‐Carrera, A., Rogers, K. L., Weber, S. C., Chanton, J. P., & Montoya, J. P. (2016). Deep Water Horizon oil and methane carbon entered the food web in the Gulf of Mexico. Limnology and Oceanography, 61(S1).
Fisher, C., Montagna, P., & Sutton, T. (2016). How Did the Deepwater Horizon Oil Spill Impact Deep-Sea Ecosystems?. Oceanography, 29(3), 182-195.
Georgian, S. E., DeLeo, D., Durkin, A., Gomez, C. E., Kurman, M., Lunden, J. J., & Cordes, E. E. (2016). Oceanographic patterns and carbonate chemistry in the vicinity of cold-water coral reefs in the Gulf of Mexico: Implications for resilience in a changing ocean. Limnology and Oceanography, 61(2), 648-665.
Giebel, H., Klotz, F., Voget, S., Poehlein, A., Grosser, K., Teske, A., & Brinkhoff, T. (2016). Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill. Standards in Genomic Sciences, 11(1).
Girard, F., Fu, B., & Fisher, C. (2016). Mutualistic symbiosis with ophiuroids limited the impact of the Deepwater Horizon oil spill on deep-sea octocorals. Marine Ecology Progress Series, 549, 89-98.
John, V., Arnosti, C., Field, J., Kujawinski, E., & MacCormick, A. (2016). The Role of Dispersants in Oil Spill Remediation: Fundamental Concepts, Rationale for Use, Fate, and Transport Issues. Oceanography, 29(3), 108-117.
Joye, S. B., Bracco, A., Özgökmen, T. M., Chanton, J. P., Grosell, M., MacDonald, I. R., Cordes, E. E., Montoya, J. P., & Passow, U. (2016). The Gulf of Mexico ecosystem, six years after the Macondo oil well blowout. Deep Sea Research Part II: Topical Studies in Oceanography, 129, 4-19.
Joye, S., Kleindienst, S., Gilbert, J., Handley, K., Weisenhorn, P., Overholt, W., & Kostka, J. (2016). Responses of Microbial Communities to Hydrocarbon Exposures. Oceanography, 29(3), 136-149.
Luo, H., Bracco, A., Cardona, Y., & McWilliams, J. C. (2016). Submesoscale circulation in the northern Gulf of Mexico: Surface processes and the impact of the freshwater river input. Ocean Modelling, 101, 68-82.
Özgökmen, T., Chassignet, E., Dawson, C., Dukhovskoy, D., Jacobs, G., Ledwell, J., Garcia-Pineda, O., MadDonald, I., Morey, S., Olascoaga, M., Poje, A., Reed, M., & Skancke, J. (2016). Over What Area Did the Oil and Gas Spread During the 2010 Deepwater Horizon Oil Spill?. Oceanography, 29(3), 96-107.
Passow, U., & Hetland, R. (2016). What Happened to All of the Oil?. Oceanography, 29(3), 88-95.
Passow, U., & Ziervogel, K. (2016). Marine Snow Sedimented Oil Released During the Deepwater Horizon Spill. Oceanography, 29(3), 118-125.
Rooze, J., & Meile, C. (2016). The effect of redox conditions and bioirrigation on nitrogen isotope fractionation in marine sediments. Geochimica et Cosmochimica Acta, 184, 227-239.
White, H., Commy, R., MacDonald, I., & Reddy, C. (2016). Methods of Oil Detection in Response to the Deepwater Horizon Oil Spill. Oceanography, 29(3), 76-87.
Yan, B., Passow, U., Chanton, J. P., Nöthig, E., Asper, V., Sweet, J., Pitiranggon, M., Diercks, A., & Pak, D. (2016). Sustained deposition of contaminants from the <i>Deepwater Horizon</i> spill. Proceedings of the National Academy of Sciences, 113(24).
Yang, T., Speare, K., McKay, L., MacGregor, B. J., Joye, S. B., & Teske, A. (2016). Distinct Bacterial Communities in Surficial Seafloor Sediments Following the 2010 Deepwater Horizon Blowout. Frontiers in Microbiology, 7.
Zhang, Z., Avij, P., Perkins, M. J., Liyana-Arachchi, T. P., Field, J. A., Valsaraj, K. T., & Hung, F. R. (2016). Combined Experimental and Molecular Simulation Investigation of the Individual Effects of Corexit Surfactants on the Aerosolization of Oil Spill Matter. The Journal of Physical Chemistry A, 120(30), 6048-6058.
Ziervogel, K., Osburn, C., Brym, A., Battles, J., Joye, S., D'souza, N., Montoya, J., Passow, U., & Arnosti, C. (2016). Linking Heterotrophic Microbial Activities with Particle Characteristics in Waters of the Mississippi River Delta in the Aftermath of Hurricane Isaac. Frontiers in Marine Science, 3.

2015

Joye, S. B. (2015). Deepwater Horizon, 5 years on. Science, 349(6248), 592-593.
Kleindienst, S., Seidel, M., Ziervogel, K., Grim, S., Loftis, K., Harrison, S., Malkin, S. Y., Perkins, M. J., Field, J., Sogin, M. L., Dittmar, T., Passow, U., Medeiros, P. M., & Joye, S. B. (2015). Chemical dispersants can suppress the activity of natural oil-degrading microorganisms. Proceedings of the National Academy of Sciences, 112(48), 14900-14905.
MacDonald, I. R., Garcia‐Pineda, O., Beet, A., Daneshgar Asl, S., Feng, L., Graettinger, G., French‐McCay, D., Holmes, J., Hu, C., Huffer, F., Leifer, I., Muller‐Karger, F., Solow, A., Silva, M., & Swayze, G. (2015). Natural and unnatural oil slicks in the <scp>G</scp>ulf of <scp>M</scp>exico. Journal of Geophysical Research: Oceans, 120(12), 8364-8380.
Rakowski, C. V., Magen, C., Bosman, S., Rogers, K. L., Gillies, L. E., Chanton, J. P., & Mason, O. U. (2015). Methane and microbial dynamics in the Gulf of Mexico water column. Frontiers in Marine Science, 2.
Ruiz-Ramos, D. V., Saunders, M., Fisher, C. R., & Baums, I. B. (2015). Home Bodies and Wanderers: Sympatric Lineages of the Deep-Sea Black Coral Leiopathes glaberrima. PLOS ONE, 10(10), e0138989.

Book Chapters - 10

2019

Berenshtein, I., Perlin, N., Murawski, S. A., Joye, S. B., & Paris, C. B. (2020). Evaluating the Effectiveness of Fishery Closures for Deep Oil Spills Using a Four-Dimensional Model. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 390-402) Springer International Publishing.
Chanton, J. P., Jaggi, A., Radović, J. R., Rosenheim, B. E., Walker, B. D., Larter, S. R., Rogers, K., Bosman, S., & Oldenburg, T. B. P. (2020). Mapping Isotopic and Dissolved Organic Matter Baselines in Waters and Sediments of the Gulf of Mexico. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 160-181) Springer International Publishing.
MacDonald, I. R., Gaytan-Caballero, A., & Escobar-Briones, E. (2020). The Asphalt Ecosystem of the Southern Gulf of Mexico: Abyssal Habitats Across Space and Time. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 132-146) Springer International Publishing.
Quigg, A., Passow, U., Daly, K. L., Burd, A., Hollander, D. J., Schwing, P. T., & Lee, K. (2020). Marine Oil Snow Sedimentation and Flocculent Accumulation (MOSSFA) Events: Learning from the Past to Predict the Future. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Deep Oil Spills (pp. 196-220) Springer International Publishing.
Romero, I. C., Chanton, J. P., Roseheim, B. E., Radović, J. R., Schwing, P. T., Hollander, D. J., Larter, S. R., & Oldenburg, T. B. P. (2020). Long-Term Preservation of Oil Spill Events in Sediments: The Case for the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Deep Oil Spills (pp. 285-300) Springer International Publishing.

2018

Joye, S. B., & Kleindienst, S. (2017). 2. Hydrocarbon seep ecosystems. In Life at Vents and Seeps (pp. 33-52) De Gruyter.

2017

Bosman, S. H., Chanton, J. P., & Rogers, K. L. (2018). Using Stable and Radiocarbon Analyses as a Forensic Tool to Find Evidence of Oil in the Particulates of the Water Column and on the Seafloor Following the 2010 Gulf of Mexico Oil Spill. In Oil Spill Environmental Forensics Case Studies (pp. 639-650) Elsevier.
Kleindienst, S. J., & S.B (2017). Global Aerobic Degradation of Hydrocarbons in Aquatic Systems. In Aerobic Utilization of Hydrocarbons, Oils and Lipids (pp. 1-18)

2016

[Author name not available] (2017). Hydrocarbon and Lipid Microbiology Protocols. In McGenity, T. J., Timmis, K. N., & Nogales, B. (Eds.), Springer Protocols Handbooks Springer Berlin Heidelberg.
[Author name not available] (2017). Hydrocarbon and Lipid Microbiology Protocols. In McGenity, T. J., Timmis, K. N., & Nogales, B. (Eds.), Springer Protocols Handbooks Springer Berlin Heidelberg.

Conference Presentations - 185

2020

Bosman, S. P., U.; Sweet, J. D., A.; Magen, C. C., & J (2020). Sinking POC from Sediment Traps in the Northern Gulf: The Rest of the Story. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Diercks, A. B., & J (2020). Diurnal Periodicity in Particle Flux in the Gulf of Mexico, Estimates from Flux Camera observed Particle Data. In Ocean Sciences Meeting 2020
Edwards, C. Z., & K.; D'souza, N. (2020). Seeding Snow: Mississippi River Plume Interaction With Oil in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Gates, H. M., J.P.; Fargher, H. J., & A.R.; Subramaniam, A. (2020). Using an Autonomous Biogeochemical Profiling Float to Determine the Effect of Natural Hydrocarbon Seeps and a Tropical Depression on the Gulf of Mexico System. In Ocean Sciences Meeting 2020
Joye, S. C., H.; Shepard, C. H., K.S.; Steffen, R. S., R.; DiPinto, L. M., & J.P (2020). The Role of Nutrient Availability in Regulating the Fate of Dispersed Oil--A Cross-Site Comparison. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Kostka, J. J., S.; Hubert, C. C., & R (2020). Microbial Genomics to Improve Predictive Understanding of Disturbance in the Global Ocean System. In 2020 AGU Ocean Science Meeting
Kostka, J.E.; Konstantinidis, K. J., & S.; Colwell, R. (2020). Microbial Genomics to Improve Predictive Understanding of Disturbance in the Global Ocean System. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
MacDonald, I. R., C.; Silva, M. O., & C (2020). Visual Assessment of an Oil and Gas Bubble Plume at MC20. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Montgomery, A. J., S.B.; Zhuang, G. H., K.; Choi, H. R., & N.N (2020). The Impact of Natural and Anthropogenic Disturbances on the Metabolism of Methane and Other C1 Compounds. In Ocean Sciences Meeting 2020
Montoya, J. L., D.A.O.; Patel, U. J., & S.B (2020). Oil and Gas Impacts on Pelagic Food Webs in the Gulf of Mexico: Isotopic Time Series Reveal the Time Scale of Ecosystem Response and Recovery. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Rooze, J. P., L.; Peterson, R. M., & C (2020). Porewater Flow Patterns at Cold Seeps Inferred From Conservative Tracer Profiles and Modeling. In 7th Annual Southern Biogeochemistry Symposium
Storo, R. G., & T.; Joye, S. (2020). Comparative genomics of isolates obtained during the Deepwater Horizon Disaster - metabolic plasticity and nutrient acquisition. In Ocean Sciences Meeting 2020
Storo, R. G., & T.; Joye, S. (2020). Metabolic Plasticity and Nutrient Acquisition Strategies of Hydrocarbon Degrading Isolates From the Deepwater Horizon Disaster. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Sutton, T. M., R.; Cook, A. F., T.; Joye, S. J., H.; Moore, J. M., S.; Vecchione, M. Y., & M (2020). A Summary of Post-Deepwater Horizon Oil Spill Open-Ocean Faunal Population Dynamics: Vulnerability, Resilience, Data Gaps, and Management Implications. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Vohsen, S. (2020). Laying a Foundation to Investigate the Role of Microbes in the Response of Corals to Oil Spills and Other Stressors: Discovery of Parasites, Chemoautotrophs, and Abundant Symbionts in Deep-Sea Corals. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Westrich, J. S., & R.; Joye, S. (2020). A Synoptic Eight-Year Analysis of Microbial Community Associated with Marine Oil Snow Deposits in the Gulf of Mexico Since the Deepwater Horizon Spill. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020
Westrich, J. S., & R.; Joye, S. (2020). Microbial Community Analysis of Recently Deposited Marine Oil Snow in the Gulf of Mexico Between 2010 to 2018. In Ocean Sciences Meeting 2020
Ziervogel, K. (2020). Microbes produce copious amounts of exopolymeric substances (EPS) as biosurfactants: what happens to all the excess organic carbon?. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2020

2019

Anderson, K. V., S.; Fisher, C. B., & I.B (2019). Occurrence and distribution of apicomplexan-related symbionts in corals across a wide depth range. In ASLO 2019 Aquatic Sciences Meeting
Baums, I. V., & S.A.; Fisher, C. (2019). Deep water coral-associated microbial communities in the Gulf of Mexico differ along gradients of natural oil and gas inputs. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Bosman, S. R., K.L.; Zhao, T. R., B.; Montoya, J. H., & D.; Chanton, J. (2019). Mapping spatial and temporal variation of seafloor organic matter D14C and d13C in the Northern Gulf of Mexico following the Deepwater Horizon Event. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Bullock, L. C. R., & R.; Fisher, C. (2019). Recovery and regrowth after sampling by deep water octocorals in the Gulf of Mexico. In ASLO 2019 Aquatic Sciences Meeting
Chanton, J. R., K.L.; Bosman, S. M., J.P.; Diercks, A. G., & S.; Passow, U. (2019). The relative importance of submarine seepage to carbon pools of the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Choi, H. M., & A.; Joye, S. (2019). Regulation of methanotrophy in ocean environments. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Cruz Reyes, R. V., S.A.; Girard, F. B., L.M.; Anderson, K. G., O.; Albertson, T. D., & G.; Fisher, C. (2019). Deep-sea Callogorgia delta octocorals closely associated with active seepage are in significantly better condition than colonies found far from active seepage. In ASLO 2019 Aquatic Sciences Meeting
Cruz Reyes, R. V., S.A.; Girard, F. B., L.M.; Anderson, K. G., O.; Albertson, T. D., & G.; Fisher, C. (2019). Deep-sea Callogorgia delta octocorals closely associated with active seepage are in significantly better condition than colonies found far from active seepage. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Diercks, A. J., S.B.; Siebert, R. M., & J.P (2019). First Complete Profile of Marine Snow Abundance in the Orca Basin, Sea Surface to Sea Floor. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Fisher, C. G., & F (2019). Significantly increasing our understanding of deep-sea ecosystems while monitoring the deep Gulf of Mexico for anthropogenic impacts. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Gade, A. V., S.; Fisher, C. B., & I.B (2019). Evolutionary History of Apicomplexan-Related Symbionts In Corals: Comparing Nuclear and Plastid Phylogeny. In ASLO 2019 Aquatic Sciences Meeting
Glickman, O. C. R., R.; Vohsen, S. F., & C.R (2019). The effects of proximity to active hydrocarbon seeps on the abundance and diversity of fauna associated with deep water octocorals. In ASLO 2019 Aquatic Sciences Meeting
Howe, K. S., K.W.; Campbell, L. B., B.J.; Thrash, J. R., N.N.; Rogener, M. J., & S.B.; Mason, O. (2019). Gulf of Mexico hypoxic zone omics data elucidate active, non-canonical methanotrophs that have the potential to impact hydrocarbon fate in the coastal zone. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Joye, S. (2019). Microbial dynamics in the anthropocene. In 2019 Gordon Research Conference on Applied and Environmental Microbiology
Montgomery, A. R., & N.N.; Joye, S. (2019). Constraining the factors that regulate methane oxidation in the northern Gulf of Mexico hypoxic zone. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Rooze, J. P., L.; Peterson, R. M., & C (2019). Dynamics of porewater flow at cold seeps inferred from conservative tracer profiles and modeling. In 2019 Gordon Research Conference on Chemical Oceanography
Stock, A. S., & A (2019). Satelite remote sensing of phytoplankton diagnostic pigment in the northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Stock, A. S., & A (2019). Comparison of potential gap-filling algorythems for satellite data in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Subramaniam, A. J., A.; Aleman, M. K., V.; Ramcharitar, B. M., & J.P (2019). Biogeography of phytoplankton community structure in the northern Gulf ofMexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019
Vohsen, S. F., & C.R.; Baums, I. (2019). A survey of deep-sea coral microbiomes in the Gulf of Mexico reveals potential symbioses and provides insight for microbes found in shallow-watr corals. In ASLO 2019 Aquatic Sciences Meeting
Ziervogel, K. S., J.; Bretherton, L. Q., & A.; Passow, U. (2019). Fragmentation of Marine Oil Snow Due to Small-Scale Turbulence. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2019

2018

Baums, I. V., & S.; Fisher, C. (2018). Deepwater coral-associated microbial communities in the Gulf of Mexico are species-specific and include sulfur-oxidizing taxa. In Marine Evolution 2018
Bracco, A. (2018). Keynote: Multiscale flows in the Gulf of Mexico: from oil dispersion to coldwater coral evolution and carbon drawdown. In Australian Coastal and Oceans Modelling and Observations Workshop (ACOMO) 2018
Bracco, A. (2018). Multiscale impacts of submesoscale flows. In 2nd OMIX International Symposium
Bracco, A. L., G.; Choi, J. Z., & Y (2018). Multi-Scale Flows and Pathways in the Gulf of Mexico and South China Sea: implications of ocean submesoscale turbulence for oil dispersion, coral evolution and carbon uptake. In American Physical Society March Meeting 2018
Chanton, J. G., S.; Rogers, K. S., J.; Asper, V. D., & A.-R.; Passow, U. (2018). Isotopic composition of sinking particles: Oil Effects, Recovery and Baselines in the Gulf of Mexico, 2010-2016. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
da Silva, C. C., & R.M (2018). Mississippi River Plume Variability in the Gulf of Mexico from SMAP and MODIS-Aqua Observations. In Buys Ballot Research School Autumn Symposium 2018
Daneshgar, S. D., W.; Skancke, W. M., & I.R (2018). Where Did the Deepwater Horizon Surface Oil Go? -A Time Series of Advection and Fate, 24 April - 3 August 2010. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Diercks, A. A., V.L.; DiMarco, S. C., & J.P.; Passow, U. (2018). Scales of Resuspension in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Edwards, C. C., R.; Ziervogel, K. D., & N.A (2018). Seeding Snow: Mississippi River Plume Interaction with Surface Oil in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Girard, F. C., R.; Harpster, T. M., T.D.; Sellitto, H. F., & C.R (2018). Cold-water corals as indicators of anthropogenic impact in the deep sea: lessons learned from the Deepwater Horizon oil spill. In 15th Deep-Sea Biology Symposium
Girard, F. C., R.; Harpster, T. M., T.D.; Sellitto, O. F., & C.R (2018). Cold-water corals as indicators of anthropogenic impact in the deep sea: lessons learned from the Deepwater Horizon oil spill. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Joye, S. H., S.J.; Pena-Montenegro, T. S., C.; Carroll, L. S., & M.A (2018). Regulation and dynamics of microbial oil degradation in nearshore and offshore waters. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Liu, G. B., & A (2018). The Seasonality of Submesoscale Mixing across the Mixed Layer in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
MacDonald, I. D., & S (2018). Remote Sensing of Persistent Oil Slicks in Mississippi Canyon 20. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
MacDonald, I. D., & S (2018). Pockmarks, bubbles, and oil slicks from an accidental seep in the Gulf of Mexico. In 14th International Conference on Gas in Marine Sediments
Martens, C. M., H.; Seim, H. R., A.; Wahl, T. A., V.; Lapham, L. J., & S.B (2018). Methane Plumes in the Deep Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Montoya, J. R., K.L.; Lee-Patterson, D. R., & C.M.; Chanton, J. (2018). Isotopic tracers of petrocarbon contribution to pelagic food webs in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Passow, U. (2018). The Biological Carbon Pump: A Transport Vehicle for Pollutants. In Ocean Sciences Meeting 2018
Rogers, K. B., S.; Lardie Gaylord, M. H., D.; Montoya, J. C., & J.P (2018). Assessing Transformations of Oil Deposited on the Seafloor of the Gulf of Mexico Using Ramped Oxidation and 14C Analysis. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Stock, A. S., & A (2018). Satellite remote sensing of phytoplankton biomarker pigments: a statistical learning approach. In Symposium on Oceanographic Data Analytics
Stock, A. S., A.; Arrigo, K. M., F.; Wedding, L. C., M.; Mills, M. v. D., & G (2018). Comparison of cloud-filling algorithms for ocean color data. In Symposium on Oceanographic Data Analytics
Subramaniam, A. J., A.R.; Montoya, J. A., & M (2018). Role of Natural Hydrocarbon Seeps in Structuring the Microbial Community in the Northern Gulf of Mexico. In Ocean Sciences Meeting 2018
Sun, D. L., & G.; Bracco, A. (2018). The Seasonality of Submesoscale Mixing across the Mixed Layer in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Thurnherr, A. D., & A.-R.; Montoya, J. (2018). Velocity Measurements From a Drifting Sediment Trap in the Northeastern Gulf. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Vohsen, S. B., & I.; Fisher, C. (2018). Deepwater coral-associated microbial communities in the Gulf of Mexico are species-specific and include sulfur-oxidizing taxa. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
Vohsen, S. B., & I.B.; Fisher, C. (2018). Large-scale survey of deep-sea coral microbiomes in the Gulf of Mexico reveals potential symbioses. In 15th Deep-Sea Biology Symposium
Wang, Y. R., P.; Ziervogel, K. M., & C (2018). Modeling sediment resuspension and methane distribution in the deep Gulf of Mexico under the effect of near-seabottom flow. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2018
You Mak, K. M., & K.; Juhl, A. (2018). Crude oil and the balance of autotrophy and heterotrophy in the Hudson River Estuary. In SICB Annual Meeting 2018
Ziervogel, K. J., & S.B.; Arnosti, C. (2018). Oil and chemcial dispersants alter microbial cycling of organic matter with consequences for carbon cycling in the ocean. In Ocean Sciences Meeting 2018

2017

[MISSING CITATION] [Author not available]. Seafloor observations at natural hydrocarbon seeps in the southern Gulf of Mexico. 6th International Symposium on Chemosynthesis-Based Ecosystems (CBE6). (2017).
[MISSING CITATION] [Author not available]. A novel and specific association of bathymodiolin mussels with Epsilonproteobacteria that is widespread at deep-sea hydrothermal vents and cold seeps. 6th International Symposium on Chemosynthesis-Based Ecosystems (CBE6). (2017).
Baums, I. D., R.; Ruiz-Ramos, D. V., & S.; Fisher, C. (2017). Ecology and Evolution of Deep Sea Coral-Associated Bacterial Communities. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Boyette, A. P., S.; Shiller, A. S. R., I.; Weidemann, A. J., S.; Cambazoglu, M. D., A.; Miles, T. G., & W (2017). Characterization of Stratified Coastal Waters in Response to a Winter Mississppi River Flood and the Opening of the Bonnet Carré Spillway, LA. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Bracco, A. C., Y.; Luo, H. Z., & Y.; Liu, G. (2017). The Gulf of Mexico: anthropogenic impacts, turbulence, oil, coral larvae and evolution. In INdAM Workshop: Mathematical Approach to Climate Change Impacts - MAC2I
Chanton, J. P., U.; Asper, V. B., S.; Sweet, J. R., K.; Diercks, A. Y., & B (2017). System Recovery and Organic Source Variability: Sinking Particulate Organic Carbon Stable and Radioisotope Time Series at 3 Sites in the Northern Gulf 2010-2014. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Clavere-Graciette, A. L., & D.A.O.; Montoya, J. (2017). Contribution of petrocarbon to pelagic food webs in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Cordes, E. (2017). Environmental impacts of the deep-water oil and gas industry: a review to guide management strategies. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Cordes, E. D., N.A.; Roman, C. L., & L.A (2017). Exploration of the water column overlying hydrocarbon seeps. In ASLO 2017 Aquatic Sciences Meeting
Cory, A. S., & W.; MacDonald, I. (2017). Ecological and Geophysical signatures of natural hydrocarbon seep sites in the Gulf of Mexico: A descriptive overview of sites GC600, GC574, GC857, and GC767. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
DeLeo, D. C., & E.E (2017). Investigating the response of cold-water corals to oil and dispersant exposure using transcriptomics. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Diercks, A. A., V.; Ziervogel, K. P., & U (2017). Vertical Abundance of Marine Snow in response to MS River Plume Water. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Edwards, C. C., R.M.; Ziervogel, K. D., & N.A (2017). Seeding snow: MS River plume interaction with surface oil in the northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Ernani, C. C., & R.; Edwards, C. (2017). Satellite-derived Variability of the Mississippi River Plume. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Giering, S. S., J.; Asper, V. D., A.; Chanton, J. Y., & B.; Passow, U. (2017). Variability in Sedimentation Dynamics in the Northern Gulf of Mexico Reflect Ecosystem and Foodweb Structure. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Harrison, S. J., & S.B (2017). A tale of two taylor transects: Lessons from a sunken oli platform in the northern Gulf of Mexico. In ASLO 2017 Aquatic Sciences Meeting
Hyde, A. (2017). Microbial community profiles and microbial carbon cycling in Orca Basin. In 4th Annual Southeastern Biogeochemistry Symposium
Hyde, A. J., & S.B.; Teske, A. (2017). Microbial stratification and microbially catalyzed processes along a hypersaline chemocline. In 2017 AGU Fall Meeting
Joye, S. (2017). Deepwater Horizon Lecture. In ASM Microbe 2017
Joye, S. (2017). Learning from a large anthropogenic perturbation: The intersection of chemistry and microbiology following the Deepwater Horizon oil spill in the Gulf of Mexico. In 254th ACS National Meeting & Exposition
Joye, S. S., M.A.; Pena-Montenegro, T. K., & S (2017). Using -omics approaches to track the response of microbial hydrocarbon degraders to natural and anthropogenic hydrocarbon inputs. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Joye, S. S., M.A.; Pena-Montenegro, T. K., & S (2017). Using -omics approaches to track the response of microbial hydrocarbon degraders to natural and anthropogenic hydrocarbon inputs. In ASLO 2017 Aquatic Sciences Meeting
Juhl, A. S., & A.; Montoya, J. (2017). Interactions between bacterial breakdown of oil, oxygen consumption and macronutrient availability in the offshore Gulf of Mexico. In ASLO 2017 Aquatic Sciences Meeting
Liu, G. B., & A.; Passow, U. (2017). Horizontal & vertical transport of marine snow in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
MacDonald, I. S., & M (2017). Recovery watch for mesophotic corals of the Pinnacle Trend. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Markey, K. P., M.; Juhl, A. Y., & B.; Subramaniam, A. (2017). Where the oil from surface and subsurface plumes deposited during/after Deepwater Horizon oil spill?. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Martens, C. M., H.; Seim, H. A., V.; Rok, A. W., T.; Lapham, L. J., & S.B (2017). Monitoring Methane Transport and Sediment Total Oxygen Utilization in the Friction Layer at GC185, GC600 and GC767 in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Montoya, J. W., S.C.; Vogts, A. V., & M (2017). NanoSIMS characterization of Methane Assimilation and N2-fixation in Response to Oil and Gas Release in Offshore Waters. In ASLO 2017 Aquatic Sciences Meeting
Montoya, J. W., S.C.; Vogts, A. V., & M (2017). NanoSIMS characterization of Methane Assimilation and N2-fixation in Response to Oil and Gas Release in Offshore Waters. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Orcutt, B. L., L.L.; Delaney, J. M., K.S.; Girguis, P. W., & C.G (2017). Microbial oil degradation in Gulf of Mexico sediment measured in situ using long-term benthic lander enrichment experiments. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Passow, U. (2017). Highway to the Benthos: Marine Snow Formation and Sedimentationn. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Passow, U. S., J.; Chiu, M. C., W.; Zhang, S. X., C.; Santschi, P. Q., & A (2017). The Role of Corexit for the Formation of Sinking Marine Oil Snow. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Pena Montenegro, T. S., M.A.; Kleindienst, S. A., & A.; Joye, S. (2017). Transcriptomics Reveal Responses of Deep-Water Microbial Communities to Oil and Dispersant Exposure. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Rogers, K. M., J.P.; Weber, S. B., S.; Rosenheim, B. C., & J (2017). The temporal evolution of sediments and suspended particulate carbon following a massive oil spill in the northern Gulf of Mexico: 2010-2015. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Subramaniam, A. J., A.; Bracco, A. M., & J.P (2017). Remote Sensing Phytoplankton Functional Types in the Northern Gulf of Mexico: Fact or Fiction. In ASLO 2017 Aquatic Sciences Meeting
Subramaniam, A. J., A.; Bracco, A. M., & J.P (2017). Remote Sensing Phytoplankton Functional Types in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Thurnherr, A. M., & J.P (2017). LADCP Observations During ECOGIG Cruise EN586. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Vohsen, S. B., & C.F (2017). The Effect of Natural Seep Exposure on the Microbial Community and Metabolome of the Deepwater Coral Callogorgia delta. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Wang, Y. Z., & K.; Meile, C. (2017). A model study of near-seabottom flow and its effect on sediment resuspension. In Georgia Water Resources Conference
Weinnig, A. C., & E.E (2017). Response to oil and dispersant exposure of Lophelia pertusa. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017
Zhuang, G. W., & G.; Joye, S. (2017). Constraining the relationships between anaerobic oxidation of methane and sulfate reduction under in situ methane concentrations. In 2017 AGU Fall Meeting
Ziervogel, K. S., & J.; Passow, U. (2017). Fate and transport of particulates below the sea surface: Testing a new method for the quantification of exopolymeric substances (EPS) using FlowCAM. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2017

2016

Astudillo, F. S., & A.; Orcutt, B. (2016). Hydrocarbon degradation pathways used by coastal sediment microbial communities exposed to crude oil. In Ocean Sciences Meeting 2016
Bracco, A. C., & J.; Joshi, K. (2016). Deep layer circulation, transport and mixing in the northern Gulf of Mexico: Deep phenomena and dispersion over the continental slope. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Bracco, A. L., & H.; McWilliams, J. (2016). Fresh water input as driver of submesoscale variability in coastal waters: The case of the Gulf of Mexico. In Ocean Sciences Meeting 2016
Chanton, J. P., U.; Bosman, S. R., K.; Hollander, D. M., & J (2016). Tracers in the Gulf: Tracing the Deepwather Horizon Oil Spill with Isotopic Analysis. In Florida American Chemical Society Meeting
Chanton, J. P., U.; Rogers, K. M., J.; Hollander, D. B., & S (2016). Tracers in the Gulf: Tracking the petrocarbon released from oil spills in the Gulf of Mexico with natural abundance radiocarbon. In American Society of Limnology and Oceanography Summer Meeting
Chanton, J. P., W.; Barnett, B. T., J.; Bosman, S. M., A.; Schwing, P. R., K.; Montoya, J. W., S.; Fernandes, A. H., A.; Landing, W. P., U.; Wilson, R. J., S.; Hollander, D. A., & V.; Dierks, A. (2016). Isotopic Tracers: Documenting Ecosystem Effects of the DWH Oil Spill. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Chanton, J. M., G.; Locker, S. P., H.; Turner, R. P., & O (2016). Climate and Sea Level Rise the nuts and bolts of an inescapable coastal driver. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Clavere-Graciette, A. L., & D.A.O.; Montoya, J. (2016). Assessing Hydrocarbon Incorporation into the Planktonic Food Web at Cold Seeps. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Cordes, E. (2016). How drilling impacts inform oil and gas management worldwide: Introducing the DOSI Oil & Gas working group. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Cordes, E. (2016). Strategies for restoration of deep-water coral ecosystems based on a global survey of oil and gas regulations. In Ocean Sciences Meeting 2016
Curtis, C. F., B.; Girard, F. F., & C.; Boyer, T. (2016). Using image-based Long-term monitoring to understand the biology and recovery of deep-sea coral communities after the Deepwater Horizon oil spill. In 6th International Symposium Deep Sea Corals
D'Souza, N. W., S.C.; Subramaniam, A. J., & A.; Montoya, J. (2016). Changes in Phytoplankton Communities in Response to Oil and Nutrients in the Northern Gulf of Mexico. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
D'Souza, N. W., S.W.; Subramaniam, A. J., A.; Montoya, J. C., & J.P (2016). Changes in Microbial and Phytoplankton Communities in Response to Oil and Nutrients in the Northern Gulf of Mexico: Correlating Experiments With Field Observations. In Ocean Sciences Meeting 2016
DeLeo, D. L., & S.D.; Cordes, E. (2016). Elucidating Oil Spill Impacts on Deep-Sea Corals Using RNAseq. In 6th International Symposium Deep Sea Corals
DeLeo, D. L., & S.D.; Cordes, E. (2016). An Integrative Investigation into the Impacts of Anthropogenic Stressors on Deep-Sea Corals. In 13th International Coral Reef Symposium
Dornhoffer, T. M., & C (2016). The use of benthic infauna to predict estuarine denitrification: Organismal and system scale analysis. In Ocean Sciences Meeting 2016
Fang, D. J., & A (2016). Effects of Crude Oil on Growth Rate and Variable Fluorescence of Marine Cyanobacteria. In Ocean Sciences Meeting 2016
Fernandez A.; Clavere-Graciette, A.; Weber S.C.; Jolley, K. L., & D.A.O.; Montoya, J. (2016). Carbon and nitrogen stable isotopes in plankton in Mississippi Canyon MC118 from 2010 to 2012: insights into nutrient sources. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Francis, S. P., & U (2016). Modeling a mass diatom-oil sedimentation event. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Harrison, S. M., S.; Saxton, M. H., & K.S.; Joye, S. (2016). Exploring hydrocarbon degradation along a surface transect within a persistent oil slick at the Taylor Energy site. In Southeastern Biogeochemical Symposium
Harrison, S., S.Y.; Saxton, M. H., & K.S.; Joye, S. (2016). Exploring microbial and hydrocarbon dynamics along a surface transect of a persistent oil slick at Taylor Energy. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Harrison, S., S.Y.; Saxton, M. H., & K.S.; Joye, S. (2016). Exploring microbial and hydrocarbon dynamics along a surface transect of a persistent oil slick at Taylor Energy. In Ocean Sciences Meeting 2016
Johansen, C. J., S.B.; Diercks, A. W., M.; Silva-Aguilera, M. S., W.; Marty, E. H., J.; Viso, R. M., L.; Abrams, M. N., & M.; Lobodin, L. (2016). Using Multi-Disciplinary Data to Compile a Hydrocarbon Budget for GC600, a Natural Seep in the Gulf of Mexico. In 2016 American Geophysical Union Fall Meeting
Johansen, C. M., & I (2016). Hydrocarbon Migration from the Micro to Macro Scale in the Gulf of Mexico. In Ocean Sciences Meeting 2016
Joye, S. (2016). Environmental regulation of aerobic and anaerobic methane oxidation across oceanic habitats. In Southeastern Biogeochemical Symposium
Joye, S. P., U.; Montoya, J. A., V.; Harrison, S. S., & R.M.; Hunter, K. (2016). Sedimentation of oil-derived material to the seabed is an unrecognized fate for oil derived from natural seepage. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Joye, S. P., U.; Montoya, J. A., V.; Harrison, S. S., & R.M.; Hunter, K. (2016). Sedimentation of oil-derived material to the seabed is an unrecognized fate for oil derived from natural seepage. In Ocean Sciences Meeting 2016
Juhl, J. F., & D (2016). Effects of Crude Oil on Growth Rate and Variable Fluorescence of Marine Cyanobacteria. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
MacDonald, I. A., & S.D (2016). Volume and Area Time Series of DWH Surface Oil: Comparison of modeling and remote sensing results. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
MacGregor, B. (2016). Intact rRNA in mercury-poisoned sediment trap samples: Preservation or growth?. In 16th International Symposium on Microbial Ecology
MacGregor, B. P., & U.; Ziervogel, K. (2016). Intact Ribosomal RNA in Mercury-poisoned Sediment Trap Samples: Preservation or Growth?. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Mitchell, G. O., D.L.; Gharib, J. S., & E.J.; Joye, S. (2016). Improved detection and mapping of deepwater hydrocarbon seeps: optimizing acquisition and processing techniques for marine seep hunting. In 2016 American Geophysical Union Fall Meeting
Montoya, J. W., S.C.; Vogts, A. V., M.; Saxton, M. J., & S.B (2016). Hydrocarbons and Deepwater Nitrogen Fixation: Who's Doing It, Where, and Why. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Montoya, J. W., S.C.; Vogts, A. V., M.; Saxton, M. J., & S.B (2016). Deepwater Nitrogen Fixation: Who's Doing it, Where, and Why?. In Ocean Sciences Meeting 2016
Orcutt, B. A., C.; Sharrar, & A.; Spaulding Astudillo, F. (2016). Crude oil biodegradation by estuarine sediment microbial communities from diverse coastal environments. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Passow, U. S., J.; Genzer, J. S., K.; Xu, C. Z., S.; Williams, A. L., Y.; Santschi, P. Q., & A (2016). Oil, Diatom Exudation and Marine Oil Snow. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Pena-Montenegro, T. K., & S.; Joye, S. (2016). Genomics and transcriptomics reveal the response of extreme microbial communities to oil and dispersant exposure. In Southeastern Biogeochemical Symposium
Pena-Montenegro, T. K., & S.; Joye, S. (2016). Genomics and transcriptomics reveal the response of extreme microbial communities to oil and dispersant exposure. In Annual Meeting of the Association of Biomolecular Resource Faclities
Roberts, B. C., A.; Rich, M. R., M.; Joye, S. R., & N (2016). Spatial patterns in water column respiration rates in the northern Gulf of Mexico hypoxic zone: results from four years of July shelfwide cruises. In Ocean Sciences Meeting 2016
Rogener, M. R., B.; Rabalais, N. S., & F.; Joye, S. (2016). Reactive Nitrogen and Methane Sinks in the Water Column of a Large Coastal Hypoxic area, the Gulf of Mexico "Dead Zone. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Rogener, M. R., B.; Rabalais, N. S., & F.; Joye, S. (2016). Microbial nitrogen sinks in the water column of a large coastal hypoxic area, the Gulf of Mexico "Dead Zone". In Ocean Sciences Meeting 2016
Rogener, M. R., B.; Rabalais, N. S., & F.; Joye, S. (2016). Microbial nitrogen sinks in the water column of a large coastal hypoxic area, the Gulf of Mexico "Dead Zone". In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Rogener, M. R., B.; Rabalais, N. S., & F.; Joye, S. (2016). Microbial nitrogen sinks in the water column of a large coastal hypoxic area, the Gulf of Mexico "Dead Zone". In Ocean Sciences Meeting 2016
Rogener, M. R., B.; Rabalais, N. S., & F.; Joye, S. (2016). Reactive Nitrogen Sinks in the Water Column of a Large Coastal Hypoxic Area, the Gulf of Mexico "Dead Zone". In Southeastern Biogeochemical Symposium
Rogers, K. (2016). Sources of Carbon to Particulates in the GOM. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Rooze, J. M., & C (2016). Hydrodynamic and environmental controls on the nitrogen isotope effect of benthic N2 production. In Ocean Sciences Meeting 2016
Rooze, J. M., & C (2016). The isotopic signature of fixed nitrogen removal in bioirrigated marine sediments. In 3rd Southeastern Biogeochemistry Symposium
Rooze, J. M., & C (2016). The effect of bioirrigation and redox conditions on nitrogen isotope fluxes in marine sediments. In Ecological Society of America Southeastern Section 65th Annual Meeting
Rooze, J. M., & C (2016). The effect of bioirrigation and redox conditions on nitrogen isotope fluxes in marine sediments. In Geological Society of America Southeastern Section 65th Annual Meeting
Saxton, M. (2016). Environmental and Microbial Regulation of Hydrate-Derived Methane Fluxes in Gulf of Mexico Sediments and Waters. In Natural Gas Hydrate Systems - Gordon Research Conference
Saxton, M. S., R.J.; Petersen, J. T., H.; Chakkiath, P. A., A.; Dubilier, N. J., & S.B (2016). Oil degradation in deep sea mussels of the genus Bathymodiolus: physiological insights from metagenomics. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Subramaniam, A. J., A.; D'Souza, N. W., & S.C.; Montoya, J. (2016). Biogeography of Phytoplankton Community Structure in the Northern Gulf of Mexico. In Ocean Sciences Meeting 2016
Subramaniam, A. J., A.; D'Souza, N. W., S.C.; Montoya, J. J., & R (2016). Use of Autonomous Platforms to Study the Hydrography around Natural Hydrocarbon Seeps in the Gulf of Mexico. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Thurnherr, A. (2016). Improving LADCP Velocity with External Heading, Pitch and Roll. In 2016 American Geophysical Union Fall Meeting
Thurnherr, A. C., & Y.; Montoya, J. (2016). Vertical-Velocity Observations in the Northeastern Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Vohsen, S. B., & I.; Fisher, C. (2016). High-Throughput Metabolomics Identifies Species- and Habitat-Specific Metabolites in Corals. In 13th International Coral Reef Symposium
Vohsen, S. B., & I.; Fisher, C. (2016). High-throughput metabolomics identifies species- and cold seep-specific metabolites in corals. In 6th International Symposium Deep Sea Corals
Wang, Y. Y., Y.; Edwards, C. M., & P (2016). Surface ocean variability and transport pathways in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Weber S.C.; D'Souza, N. S., A.; Juhl, A. M., & J.P (2016). Release from limitation: Exploring phytoplankton nutrient limitation and community shifts in the Gulf of Mexico. In Gulf of Mexico Oil Spill & Ecosystem Science Conference 2016
Wilson, R. C., & J.P (2016). Understanding the role oil and surfactants play in controlling gas hydrate stability. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016
Ziervogel, K. D., A.; Joye, S. A., C.; Passow, U. M., J.P.A.7:A.50.; Asper, V. B., J.J.; Dike, C. D., & N (2016). Storm-induced sediment resuspension affects particle flux and bacterial activities in the deep Gulf of Mexico. In Gulf of Mexico Oil Spill and Ecosystem Science Conference 2016

2015

Bracco, A. (2015). Mesoscale and submesoscale variability and biogeochemical interactions. In School on Ocean Climate Modelling: Physical and Biogeochemical Dynamics of Semi- Enclosed Seas
Bracco, A. L., H.; Zhong, Y. J., & K (2015). Submesoscale Processes and Ocean Transport at Surface and Depth: The Case of the Gulf of Mexico. In Gordon Research Conference on Coastal Ocean Modeling
Cordes, E. (2015). Deep ocean stewardship issues related to the oil & gas industry. In 14th Deep-Sea Biology Symposium
DeLeo, D. L., & S.; Cordes, E. (2015). Transcriptomics as a Tool to Investigate the Responses of Cold-water Corals to Anthropogenic Stressors. In 14th Deep-Sea Biology Symposium
Fernandez, A. W., S.C.; Lee-Patterson, D. M., & J.P (2015). Tracing the Deepwater Horizon oil and methane carbon into the planktonic food web. In 2015 ASLO Aquatic Sciences Meeting
Fisher, C. G., & F (2015). Update on the status of deep water corals impacted by the Deepwater Horizon oil spill. In 14th Deep-Sea Biology Symposium
Girard, F. F., & C.; Fu, B. (2015). Understanding the impact of the Deepwater Horizon oil spill on coral communities in the deep gulf of Meixico: the importance of symbiosis. In 14th Deep-Sea Biology Symposium
Joye, S. (2015). A Sea of Change: Tracking the microbial response to the Deepwater Horizon Oil Well Blowout. In 115th American Society for Microbiology General Meeting
Montoya, J. W., S.C.; Fernandez, A. L., D.A.O.; Villareal, T. B., & A.; Joye, S. (2015). Spills, seeps, and cycles: Methane links the carbon and nitrogen cycles through diazotrophy. In 2015 ASLO Aquatic Sciences Meeting
Passow, U. (2015). Ocean acidification, warming and the Biological carbon pump. In PICES Meeting; Effects of climate change on the world's oceans
Ruiz-Ramos, D. D., R.; Fisher, C. V., & S (2015). Ecology and Evolution of Deep Sea Coral-Associated Bacterial Communities. In Society for Molecular Biology and Evolution (SMBE) 2015
Sharrar, A. A., & C.; Orcutt, B. (2015). Influence of temperature and nutrients on the chemistry and microbiology of crude oil biodegradation in coastal sediments. In 2015 Aquatic Science Meeting
Weber, S. F., A.; Battles, J. P., L.; Roberts, B. P., R.N.; Hollander, D. C., J.P.; Joye, S. M., & J.P (2015). Timescales of ecosystem response: An oil and gas blowout event comparison. In 2015 ASLO Aquatic Sciences Meeting
Ziervogel, K. (2015). The Enzymology of Hydrocarbon Breakdown in Marine Environments. In 115th American Society for Microbiology General Meeting
This research was made possible by a grant from The Gulf of Mexico Research Initiative.
www.gulfresearchinitiative.org